Region Query
displays for each input region chr:start-end with start <= end (e.g. chr16:75423948-75424405) all REMs which are contained in it
GET /REST_API/RegionQuery/50/chr16:75423948-75424405/?format=api
[
{
"geneID": "ENSG00000252122",
"geneSymbol": "SNORA76",
"REMID": "REM0896994",
"chr": "chr16",
"start": 75423702,
"end": 75425251,
"regressionCoefficient": 0.141546,
"pValue": 0.356196,
"normModelScore": 0.259456,
"version": 1,
"REMsPerCREM": "19",
"CREMID": "CREM0140214",
"cellTypeScore": {
"cd14-positive monocyte": -0.04331276666666667,
"cd14-positive, cd16-negative classical monocyte": -0.0394481,
"macrophage": -0.036146614285714286,
"cd8-positive, alpha-beta t cell": -0.0369693,
"cd34-negative, cd41-positive, cd42-positive megakaryocyte cell": -0.01310575,
"inflammatory macrophage": -0.026466499999999997,
"erythroblast": -0.0207613,
"acute myeloid leukemia": -0.033918961923076925,
"cd4-positive, alpha-beta t cell": -0.0241356,
"chronic lymphocytic leukemia": -0.015839415,
"macrophage - lps": -0.0291012025,
"macrophage – b-glucan": -0.02739895,
"acute lymphocytic leukemia": -0.0472835,
"psoas muscle": -0.0428381,
"muscle of leg": -0.03265271375,
"muscle of back": -0.024858051,
"renal cortex interstitium": 0.08709660000000001,
"kidney": 0.07736815,
"thymus": -0.053141275,
"muscle of arm": -0.019829871428571427,
"left renal pelvis": 0.10303425000000001,
"left lung": -0.03822638333333333,
"right renal cortex interstitium": 0.030262716666666672,
"hindlimb muscle": -0.0347062,
"adrenal gland": 0.02516894,
"right lung": -0.0508686,
"small intestine": 0.072925816,
"renal pelvis": 0.0872322,
"right renal pelvis": 0.110002825,
"trophoblast cell": -0.0735868,
"stomach": -0.03728532375,
"heart": 0.014661150000000001,
"skin fibroblast": -0.051793366666666674,
"left renal cortex interstitium": 0.048711129750000005,
"spinal cord": -0.0632663,
"ovary": -0.00047109499999999993,
"large intestine": 0.12245838333333335,
"fibroblast of skin of abdomen": -0.053194,
"pancreas": 0.01751375,
"h1-hesc": -0.0371532,
"spleen": -0.065443,
"left kidney": 0.150841,
"imr-90": -0.0217506,
"testis": 0.043179,
"forelimb muscle": -0.0220503,
"muscle of trunk": -0.0556101
},
"cellTypeDNase1Signal": {
"cd14-positive monocyte": 0.3251543333333333,
"cd14-positive, cd16-negative classical monocyte": 0.37282,
"macrophage": 0.3973857142857143,
"cd8-positive, alpha-beta t cell": 0.355606,
"cd34-negative, cd41-positive, cd42-positive megakaryocyte cell": 0.700712,
"inflammatory macrophage": 0.3452855,
"erythroblast": 0.647543,
"acute myeloid leukemia": 0.565038923076923,
"cd4-positive, alpha-beta t cell": 0.597731,
"chronic lymphocytic leukemia": 0.7086815,
"macrophage - lps": 0.51739975,
"macrophage – b-glucan": 0.410323,
"acute lymphocytic leukemia": 0.422582,
"psoas muscle": 0.576375,
"muscle of leg": 0.54345075,
"muscle of back": 0.57794294,
"renal cortex interstitium": 1.7885966666666668,
"kidney": 1.7825775000000001,
"thymus": 0.41797650000000003,
"muscle of arm": 0.6900724285714286,
"left renal pelvis": 1.9217000000000002,
"left lung": 0.43060000000000004,
"right renal cortex interstitium": 1.1968863333333333,
"hindlimb muscle": 0.491749,
"adrenal gland": 1.062324,
"right lung": 0.38576259999999996,
"small intestine": 2.1505548,
"renal pelvis": 1.7618533333333335,
"right renal pelvis": 1.952645,
"trophoblast cell": 0.331096,
"stomach": 0.5512649999999999,
"heart": 0.9956210000000001,
"skin fibroblast": 0.17712733333333333,
"left renal cortex interstitium": 1.355628,
"spinal cord": 0.376613,
"ovary": 0.833209,
"large intestine": 2.5587751666666665,
"fibroblast of skin of abdomen": 0.297068,
"pancreas": 1.0160065,
"h1-hesc": 0.517088,
"spleen": 0.365766,
"left kidney": 2.56026,
"imr-90": 0.622254,
"testis": 1.52019,
"forelimb muscle": 0.624777,
"muscle of trunk": 0.393367
}
},
{
"geneID": "ENSG00000273971",
"geneSymbol": "RP11-77K12.10",
"REMID": "REM0896996",
"chr": "chr16",
"start": 75424098,
"end": 75424857,
"regressionCoefficient": -0.36384,
"pValue": 0.0899636,
"normModelScore": 0.635417,
"version": 1,
"REMsPerCREM": "19",
"CREMID": "CREM0140214",
"cellTypeScore": {
"cd14-positive monocyte": 0.006552903333333333,
"cd14-positive, cd16-negative classical monocyte": 0.00491362,
"macrophage": 0.006795928571428572,
"cd8-positive, alpha-beta t cell": 0.00519303,
"cd34-negative, cd41-positive, cd42-positive megakaryocyte cell": 0.003320525,
"inflammatory macrophage": 0.0054425,
"erythroblast": 0.0035325,
"acute myeloid leukemia": 0.0059721900000000005,
"cd4-positive, alpha-beta t cell": 0.00649016,
"chronic lymphocytic leukemia": 0.003510075,
"macrophage - lps": 0.0054427925,
"macrophage – b-glucan": 0.0052653100000000005,
"acute lymphocytic leukemia": 0.0107261,
"psoas muscle": 0.00784276,
"muscle of leg": 0.0050959162500000005,
"muscle of back": 0.0036808807,
"renal cortex interstitium": -0.0119892,
"kidney": -0.0110816425,
"thymus": 0.008547235,
"muscle of arm": 0.002732241428571428,
"left renal pelvis": -0.017773325,
"left lung": 0.005805278333333334,
"right renal cortex interstitium": -0.00657572,
"hindlimb muscle": 0.00630673,
"adrenal gland": -0.0010594912666666667,
"right lung": 0.007155868,
"small intestine": -0.020081578000000003,
"renal pelvis": -0.012182793333333336,
"right renal pelvis": -0.0165704825,
"trophoblast cell": 0.0147489,
"stomach": 0.00570243875,
"heart": -0.0006701615,
"skin fibroblast": 0.00799061,
"left renal cortex interstitium": -0.008821417500000001,
"spinal cord": 0.00529908,
"ovary": 0.00221972,
"large intestine": -0.02704021166666667,
"fibroblast of skin of abdomen": 0.00860547,
"pancreas": -0.0035342100000000003,
"h1-hesc": 0.00404279,
"spleen": 0.00689979,
"left kidney": -0.0216388,
"imr-90": 0.00564535,
"testis": -0.00432607,
"forelimb muscle": 0.00157993,
"muscle of trunk": 0.00640959
},
"cellTypeDNase1Signal": {
"cd14-positive monocyte": 0.2948633333333333,
"cd14-positive, cd16-negative classical monocyte": 0.456214,
"macrophage": 0.38410125714285714,
"cd8-positive, alpha-beta t cell": 0.531586,
"cd34-negative, cd41-positive, cd42-positive megakaryocyte cell": 0.8148435,
"inflammatory macrophage": 0.44216750000000005,
"erythroblast": 0.799569,
"acute myeloid leukemia": 0.6093977692307692,
"cd4-positive, alpha-beta t cell": 0.489033,
"chronic lymphocytic leukemia": 0.6943170000000001,
"macrophage - lps": 0.53644075,
"macrophage – b-glucan": 0.4575935,
"acute lymphocytic leukemia": 0.509225,
"psoas muscle": 0.629253,
"muscle of leg": 0.630372125,
"muscle of back": 0.7211423000000001,
"renal cortex interstitium": 2.7298899999999997,
"kidney": 2.3444225000000003,
"thymus": 0.41087825,
"muscle of arm": 0.8864851428571427,
"left renal pelvis": 3.1516875000000004,
"left lung": 0.46872716666666664,
"right renal cortex interstitium": 1.7794666666666668,
"hindlimb muscle": 0.580927,
"adrenal gland": 1.3230953333333335,
"right lung": 0.49702060000000003,
"small intestine": 3.6570704000000007,
"renal pelvis": 2.54679,
"right renal pelvis": 2.7159925,
"trophoblast cell": 0.353626,
"stomach": 0.607839875,
"heart": 1.229345,
"skin fibroblast": 0.19237133333333334,
"left renal cortex interstitium": 2.019215,
"spinal cord": 0.5733725000000001,
"ovary": 0.923427,
"large intestine": 4.435433666666667,
"fibroblast of skin of abdomen": 0.3849885,
"pancreas": 1.4725350000000001,
"h1-hesc": 0.674936,
"spleen": 0.549085,
"left kidney": 3.28396,
"imr-90": 0.582587,
"testis": 1.73929,
"forelimb muscle": 0.945959,
"muscle of trunk": 0.460728
}
}
]